Software
| Utilities for manipulation of common phylogenetic
analysis files in Windows. Written for execution in
Python 2.5.2
|
|
| nex2dat.py instructions_nex2 |
Module for Python that takes Nexus format data file
and outputs .dat format file. |
|
pairwise_distances.py instructions_pd |
Module for Python that takes pairwise distances
output in the form of a Paup log file and puts all
pairwise distances in a single column. |
| short_genbank.py | Module for Python that takes exported genbank files
and truncates the filename to <10 characters without
taxon label redundancy. Ready for import to programs
requiring .dat format. Also outputs a csv file (open in
Excel) showing old name and new name. |
| Written by: dfdeshom@gmail.com. Versions in progress, coding history, and most recent versions hosted at |